Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | DSHI_RS12340 | Not Available | Positive | 2565692 - 2567371 | 58427.8 |
| s8 family serine peptidase | DSHI_RS12345 | Not Available | Negative | 2567452 - 2568609 | 40128.7 |
| anti-sigma factor | DSHI_RS12350 | Not Available | Positive | 2568795 - 2569361 | 20322.9 |
| rna polymerase sigma factor | DSHI_RS12355 | Not Available | Negative | 2569367 - 2569903 | 19905.0 |
| fggy-family carbohydrate kinase | DSHI_RS12360 | Not Available | Negative | 2570227 - 2571612 | 48429.9 |
| l-rhamnose mutarotase | DSHI_RS12365 | Not Available | Negative | 2571609 - 2571923 | 12083.6 |
| abc transporter permease | DSHI_RS12370 | Not Available | Negative | 2571923 - 2572909 | 34903.1 |
| abc transporter permease | DSHI_RS12375 | Not Available | Negative | 2572906 - 2573889 | 34285.4 |
| sugar abc transporter atp-binding protein | DSHI_RS12380 | Not Available | Negative | 2573902 - 2575434 | 54801.9 |
| rhamnose abc transporter substrate-binding protein | DSHI_RS12385 | Not Available | Negative | 2575507 - 2576508 | 34381.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
