Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DSHI_RS10720 | Not Available | Negative | 2231752 - 2232006 | 9417.36 |
| hypothetical protein | DSHI_RS10725 | Not Available | Positive | 2232106 - 2232831 | 26585.8 |
| cation:proton antiporter | DSHI_RS10730 | Not Available | Negative | 2234212 - 2236719 | 91100.8 |
| dsd1 family plp-dependent enzyme | DSHI_RS10735 | Not Available | Negative | 2236892 - 2238034 | 39756.9 |
| pseudouridine-5'-phosphate glycosidase | DSHI_RS10740 | Not Available | Positive | 2238185 - 2239102 | 31829.4 |
| formyltetrahydrofolate deformylase | DSHI_RS10745 | Not Available | Negative | 2239132 - 2240028 | 32532.1 |
| l-serine ammonia-lyase | DSHI_RS10750 | Not Available | Negative | 2240003 - 2241415 | 49014.6 |
| serine hydroxymethyltransferase | DSHI_RS10755 | Not Available | Negative | 2241420 - 2242694 | 44942.7 |
| sarcosine oxidase subunit gamma | DSHI_RS10760 | Not Available | Negative | 2242777 - 2243307 | 18734.5 |
| sarcosine oxidase subunit alpha | DSHI_RS10765 | Not Available | Negative | 2243321 - 2246323 | 108936.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
