Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-dependent carboxyltransferase family protein | DSHI_RS10330 | Not Available | Negative | 2147043 - 2148059 | 34890.7 |
| allophanate hydrolase subunit 1 | DSHI_RS10335 | Not Available | Negative | 2148056 - 2148793 | 26054.1 |
| laci family dna-binding transcriptional regulator | DSHI_RS10340 | Not Available | Negative | 2149164 - 2150222 | 37220.9 |
| hypothetical protein | DSHI_RS10345 | Not Available | Positive | 2150383 - 2150574 | 6776.42 |
| trap transporter substrate-binding protein | DSHI_RS10350 | Not Available | Positive | 2150586 - 2151734 | 40896.3 |
| trap transporter small permease | DSHI_RS10355 | Not Available | Positive | 2151852 - 2152367 | 19759.7 |
| trap transporter large permease | DSHI_RS10360 | Not Available | Positive | 2152380 - 2153708 | 46259.6 |
| histidinol dehydrogenase | DSHI_RS10365 | Not Available | Positive | 2153718 - 2155025 | 46732.7 |
| sdr family nad(p)-dependent oxidoreductase | DSHI_RS10370 | Not Available | Positive | 2155018 - 2155782 | 25918.8 |
| alcohol dehydrogenase catalytic domain-containing protein | DSHI_RS10375 | Not Available | Positive | 2155779 - 2156762 | 34113.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
