Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | DSHI_RS10180 | Not Available | Negative | 2115813 - 2117255 | 49689.1 |
| atp-binding cassette domain-containing protein | DSHI_RS10185 | Not Available | Negative | 2117255 - 2118001 | 27071.8 |
| sugar abc transporter permease | DSHI_RS10190 | Not Available | Negative | 2117998 - 2119305 | 45916.6 |
| d-xylose abc transporter substrate-binding protein | DSHI_RS10195 | Not Available | Negative | 2119423 - 2120445 | 35191.1 |
| rok family protein | DSHI_RS10200 | Not Available | Positive | 2120703 - 2121902 | 42577.3 |
| vcbs repeat-containing protein | DSHI_RS10205 | Not Available | Positive | 2121899 - 2123377 | 52337.5 |
| hypothetical protein | DSHI_RS10210 | Not Available | Positive | 2123844 - 2124359 | 17844.3 |
| ferric reductase-like transmembrane domain-containing protein | DSHI_RS10215 | Not Available | Positive | 2124331 - 2124954 | 21829.4 |
| cytochrome-c peroxidase | DSHI_RS10220 | Not Available | Negative | 2125127 - 2126482 | 47618.5 |
| pas sensor domain-containing protein | DSHI_RS10225 | Not Available | Negative | 2126545 - 2126922 | 14063.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
