Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | DSHI_RS08960 | Not Available | Negative | 1823438 - 1824259 | 29734.6 |
| lysophospholipid acyltransferase family protein | DSHI_RS08965 | Not Available | Negative | 1824259 - 1825137 | 32253.0 |
| indolepyruvate ferredoxin oxidoreductase family protein | DSHI_RS08970 | Not Available | Negative | 1825196 - 1828603 | 122936.0 |
| lysr family transcriptional regulator | DSHI_RS08975 | Not Available | Positive | 1828760 - 1829662 | 34224.9 |
| s9 family peptidase | DSHI_RS08980 | Not Available | Positive | 1829905 - 1830690 | 28662.9 |
| abc transporter atp-binding protein/permease | DSHI_RS08985 | Not Available | Negative | 1830691 - 1832526 | 67365.7 |
| lysm peptidoglycan-binding domain-containing protein | DSHI_RS08990 | Not Available | Negative | 1832580 - 1834175 | 53677.5 |
| tigr00730 family rossman fold protein | DSHI_RS09000 | Not Available | Positive | 1834326 - 1834865 | 18884.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DSHI_RS09005 | Not Available | Negative | 1835047 - 1835688 | 21127.6 |
| phosphogluconate dehydratase | DSHI_RS09010 | Not Available | Negative | 1835700 - 1837505 | 62945.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
