Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase domain-containing protein | DSHI_RS00705 | Not Available | Negative | 140693 - 142909 | 79628.2 |
| p-ii family nitrogen regulator | DSHI_RS00710 | Not Available | Positive | 143197 - 143535 | 12241.9 |
| ammonium transporter | DSHI_RS00715 | Not Available | Positive | 143570 - 144883 | 46092.8 |
| amino acid aminotransferase | DSHI_RS00720 | Not Available | Negative | 145044 - 146222 | 42155.7 |
| 3-mercaptopyruvate sulfurtransferase | DSHI_RS00725 | Not Available | Negative | 146231 - 147082 | 30655.4 |
| ssra-binding protein smpb | DSHI_RS00730 | Not Available | Negative | 147392 - 147874 | 18720.6 |
| gnat family n-acetyltransferase | DSHI_RS22180 | Not Available | Negative | 147905 - 148243 | 11896.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DSHI_RS00740 | Not Available | Negative | 148351 - 149226 | 29893.2 |
| lytic transglycosylase domain-containing protein | DSHI_RS00745 | Not Available | Positive | 149400 - 151349 | 71654.0 |
| dmt family transporter | DSHI_RS00750 | Not Available | Negative | 151387 - 152265 | 31350.9 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
