Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | DSHI_RS07985 | Not Available | Negative | 1634542 - 1635918 | 49829.1 |
| hypothetical protein | DSHI_RS07990 | Not Available | Positive | 1636081 - 1636563 | 16521.6 |
| hypothetical protein | DSHI_RS07995 | Not Available | Positive | 1636586 - 1637023 | 15374.5 |
| sigma-54 dependent transcriptional regulator | DSHI_RS08000 | Not Available | Negative | 1637185 - 1638600 | 51655.0 |
| pas domain-containing sensor histidine kinase | DSHI_RS08005 | Not Available | Negative | 1638597 - 1640813 | 81234.8 |
| response regulator | DSHI_RS08010 | Not Available | Negative | 1640962 - 1642326 | 49645.3 |
| nitrogen regulation protein nr(ii) | DSHI_RS08015 | Not Available | Negative | 1642326 - 1643399 | 38995.0 |
| trna dihydrouridine synthase dusb | DSHI_RS08020 | Not Available | Negative | 1643396 - 1644397 | 34932.3 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DSHI_RS08025 | Not Available | Positive | 1644594 - 1645742 | 39915.9 |
| phosphatidylglycerophosphatase a | DSHI_RS08030 | Not Available | Positive | 1645739 - 1646227 | 17145.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
