Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | DSHI_RS07640 | Not Available | Positive | 1561065 - 1561640 | 21300.2 |
| 3-hydroxyacyl-acp dehydratase fabz | DSHI_RS07645 | Not Available | Positive | 1561725 - 1562216 | 17979.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DSHI_RS07650 | Not Available | Positive | 1562213 - 1563013 | 27885.6 |
| lpxi family protein | DSHI_RS07655 | Not Available | Positive | 1563017 - 1563814 | 27213.7 |
| lipid-a-disaccharide synthase | DSHI_RS07660 | Not Available | Positive | 1563814 - 1564956 | 40156.3 |
| hint domain-containing protein | DSHI_RS21340 | Not Available | Negative | 1564953 - 1566149 | 42202.6 |
| trna 2-thiouridine(34) synthase mnma | DSHI_RS07670 | Not Available | Negative | 1566319 - 1567473 | 41478.2 |
| duf1153 domain-containing protein | DSHI_RS07675 | Not Available | Positive | 1567599 - 1567877 | 10334.3 |
| response regulator transcription factor ctra | DSHI_RS07680 | Not Available | Positive | 1567977 - 1568690 | 26464.2 |
| nad-dependent dna ligase liga | DSHI_RS07685 | Not Available | Positive | 1568832 - 1570955 | 76247.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
