Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DSHI_RS07595 | Not Available | Negative | 1550866 - 1551678 | 28981.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DSHI_RS07600 | Not Available | Negative | 1551737 - 1552627 | 32548.0 |
| ump kinase | DSHI_RS07605 | Not Available | Positive | 1552731 - 1553468 | 26513.2 |
| ribosome recycling factor | DSHI_RS07610 | Not Available | Positive | 1553599 - 1554165 | 21152.3 |
| polyprenyl diphosphate synthase | DSHI_RS07615 | Not Available | Positive | 1554231 - 1554962 | 27654.2 |
| phosphatidate cytidylyltransferase | DSHI_RS07620 | Not Available | Positive | 1554983 - 1555774 | 27638.8 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DSHI_RS07625 | Not Available | Positive | 1555798 - 1556979 | 41418.5 |
| rip metalloprotease rsep | DSHI_RS07630 | Not Available | Positive | 1557041 - 1558378 | 47660.9 |
| hypothetical protein | DSHI_RS22260 | Not Available | Positive | 1558469 - 1558609 | 4621.76 |
| outer membrane protein assembly factor bama | DSHI_RS07635 | Not Available | Positive | 1558817 - 1561063 | 82774.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
