Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DSHI_RS06500 | Not Available | Positive | 1325167 - 1326291 | 39856.9 |
| atp-binding cassette domain-containing protein | DSHI_RS06505 | Not Available | Positive | 1326293 - 1327087 | 28588.8 |
| hypothetical protein | DSHI_RS06510 | Not Available | Positive | 1327074 - 1327316 | 8894.89 |
| phytanoyl-coa dioxygenase family protein | DSHI_RS06515 | Not Available | Positive | 1327313 - 1328482 | 41254.0 |
| 5-deoxy-glucuronate isomerase | DSHI_RS06520 | Not Available | Positive | 1328494 - 1329306 | 29627.9 |
| aminotransferase class v-fold plp-dependent enzyme | DSHI_RS06525 | Not Available | Negative | 1329323 - 1330588 | 44404.0 |
| nad(p)h-dependent oxidoreductase subunit e | DSHI_RS06530 | Not Available | Positive | 1330881 - 1332578 | 61291.3 |
| formate dehydrogenase subunit alpha | DSHI_RS06535 | Not Available | Positive | 1332581 - 1335382 | 102242.0 |
| formate--tetrahydrofolate ligase | DSHI_RS06540 | Not Available | Positive | 1335512 - 1337179 | 59109.3 |
| chorismate mutase | DSHI_RS06545 | Not Available | Positive | 1337238 - 1337558 | 11688.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
