Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol 2-dehydrogenase | DSHI_RS06450 | Not Available | Negative | 1314155 - 1315138 | 34713.5 |
| class ii fructose-bisphosphate aldolase | DSHI_RS06455 | Not Available | Negative | 1315135 - 1315977 | 29756.5 |
| 5-deoxy-glucuronate isomerase | DSHI_RS06460 | Not Available | Negative | 1315974 - 1316834 | 31506.3 |
| 5-dehydro-2-deoxygluconokinase | DSHI_RS06465 | Not Available | Negative | 1316838 - 1317836 | 34653.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | DSHI_RS06470 | Not Available | Negative | 1317836 - 1319701 | 66988.2 |
| gfo/idh/moca family protein | DSHI_RS06475 | Not Available | Positive | 1319800 - 1320918 | 40206.7 |
| sugar phosphate isomerase/epimerase | DSHI_RS06480 | Not Available | Positive | 1320915 - 1321811 | 32780.7 |
| gfo/idh/moca family protein | DSHI_RS06485 | Not Available | Positive | 1321819 - 1322952 | 40531.2 |
| laci family dna-binding transcriptional regulator | DSHI_RS06490 | Not Available | Negative | 1322983 - 1323981 | 36186.5 |
| sugar abc transporter substrate-binding protein | DSHI_RS06495 | Not Available | Positive | 1324154 - 1325101 | 33343.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
