Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DSHI_RS00390 | Not Available | Negative | 78969 - 79949 | 34647.4 |
| 3-isopropylmalate dehydrogenase | DSHI_RS00395 | Not Available | Negative | 80080 - 81186 | 39246.1 |
| endonuclease/exonuclease/phosphatase family protein | DSHI_RS00400 | Not Available | Negative | 81262 - 82386 | 40481.0 |
| 3-isopropylmalate dehydratase small subunit | DSHI_RS00405 | Not Available | Negative | 82492 - 83097 | 22085.4 |
| hded family acid-resistance protein | DSHI_RS00410 | Not Available | Negative | 83135 - 83674 | 18721.8 |
| 3-isopropylmalate dehydratase large subunit | DSHI_RS00415 | Not Available | Negative | 83697 - 85100 | 50387.1 |
| heme-binding protein | DSHI_RS00420 | Not Available | Positive | 85448 - 86014 | 20878.5 |
| ribosome silencing factor | DSHI_RS00425 | Not Available | Positive | 86213 - 86545 | 12162.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DSHI_RS00430 | Not Available | Positive | 86564 - 87034 | 16762.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DSHI_RS00435 | Not Available | Positive | 87158 - 88675 | 53050.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
