Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | DSHI_RS06010 | Not Available | Negative | 1209449 - 1210306 | 31338.4 |
| thioredoxin-dependent thiol peroxidase | DSHI_RS06015 | Not Available | Negative | 1210336 - 1210797 | 16792.1 |
| asma-like c-terminal region-containing protein | DSHI_RS06020 | Not Available | Positive | 1210889 - 1214206 | 114803.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DSHI_RS06025 | Not Available | Positive | 1214235 - 1215296 | 38503.9 |
| m20/m25/m40 family metallo-hydrolase | DSHI_RS06030 | Not Available | Negative | 1215344 - 1216738 | 49349.5 |
| 5-aminolevulinate synthase | DSHI_RS06035 | Not Available | Positive | 1216936 - 1218159 | 44179.3 |
| rodz domain-containing protein | DSHI_RS06040 | Not Available | Positive | 1218363 - 1219592 | 43223.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DSHI_RS06045 | Not Available | Positive | 1219665 - 1220816 | 40880.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DSHI_RS06050 | Not Available | Negative | 1220983 - 1221825 | 30203.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DSHI_RS06055 | Not Available | Negative | 1221827 - 1222810 | 33567.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
