Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metalloprotease | DSHI_RS05960 | Not Available | Negative | 1196727 - 1198073 | 48524.1 |
| pyridoxal phosphate-dependent aminotransferase | DSHI_RS05965 | Not Available | Positive | 1198126 - 1199301 | 41532.5 |
| n-acetylmuramoyl-l-alanine amidase | DSHI_RS05970 | Not Available | Positive | 1199349 - 1200617 | 45185.8 |
| class i sam-dependent methyltransferase | DSHI_RS05975 | Not Available | Negative | 1200611 - 1201234 | 23077.9 |
| penicillin-binding protein 1a | DSHI_RS05980 | Not Available | Positive | 1201406 - 1203928 | 91128.1 |
| peptide chain release factor 2 | DSHI_RS05985 | Not Available | Positive | 1204202 - 1205329 | 41441.3 |
| abc transporter substrate-binding protein | DSHI_RS05990 | Not Available | Positive | 1205414 - 1206421 | 35341.4 |
| duf2189 domain-containing protein | DSHI_RS05995 | Not Available | Positive | 1206505 - 1207314 | 28890.3 |
| polymer-forming cytoskeletal protein | DSHI_RS06000 | Not Available | Negative | 1207399 - 1207956 | 18847.2 |
| duf5930 domain-containing protein | DSHI_RS06005 | Not Available | Negative | 1207946 - 1209274 | 48499.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
