Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taxi family trap transporter solute-binding subunit | DSHI_RS05560 | Not Available | Positive | 1114171 - 1115130 | 33447.6 |
| trap transporter fused permease subunit | DSHI_RS05565 | Not Available | Positive | 1115143 - 1116930 | 61437.1 |
| trap transporter substrate-binding protein dctp | DSHI_RS05570 | Not Available | Positive | 1117014 - 1118006 | 35346.7 |
| trap transporter small permease | DSHI_RS05575 | Not Available | Positive | 1118068 - 1118565 | 17750.2 |
| trap transporter large permease | DSHI_RS05580 | Not Available | Positive | 1118562 - 1119836 | 44668.1 |
| oxaloacetate decarboxylase | DSHI_RS05585 | Not Available | Positive | 1119841 - 1120722 | 31534.8 |
| hypothetical protein | DSHI_RS05590 | Not Available | Positive | 1121047 - 1121310 | 9019.81 |
| gaf domain-containing protein | DSHI_RS05595 | Not Available | Positive | 1121397 - 1122380 | 34738.0 |
| aldehyde dehydrogenase | DSHI_RS05600 | Not Available | Positive | 1122494 - 1124014 | 55377.1 |
| sgnh/gdsl hydrolase family protein | DSHI_RS05605 | Not Available | Negative | 1124071 - 1124751 | 24331.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
