Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | DSHI_RS05310 | Not Available | Positive | 1069438 - 1070742 | 46177.6 |
| asp/glu racemase | DSHI_RS05315 | Not Available | Negative | 1070739 - 1071509 | 26783.2 |
| nad(p)/fad-dependent oxidoreductase | DSHI_RS05320 | Not Available | Negative | 1071506 - 1072714 | 43003.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DSHI_RS05325 | Not Available | Negative | 1072711 - 1075002 | 79361.5 |
| trap transporter large permease | DSHI_RS05330 | Not Available | Negative | 1075005 - 1076324 | 47127.3 |
| trap transporter small permease | DSHI_RS05335 | Not Available | Negative | 1076328 - 1076834 | 18720.6 |
| c4-dicarboxylate abc transporter substrate-binding protein | DSHI_RS05340 | Not Available | Negative | 1076851 - 1077846 | 35321.9 |
| gntr family transcriptional regulator | DSHI_RS05345 | Not Available | Positive | 1078350 - 1079054 | 25883.1 |
| coa ester lyase | DSHI_RS22485 | Not Available | Positive | 1079051 - 1079896 | 28670.4 |
| amidase | DSHI_RS22490 | Not Available | Positive | 1079893 - 1081023 | 37301.9 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
