Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | DSHI_RS05210 | Not Available | Positive | 1051254 - 1053368 | 76403.2 |
| hypothetical protein | DSHI_RS05215 | Not Available | Positive | 1053434 - 1053700 | 9759.01 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DSHI_RS05220 | Not Available | Negative | 1053712 - 1055025 | 47771.3 |
| hypothetical protein | DSHI_RS05225 | Not Available | Positive | 1055162 - 1056058 | 33667.0 |
| trna (guanosine(46)-n(7))-methyltransferase trmb | DSHI_RS05230 | Not Available | Positive | 1056510 - 1057241 | 27558.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DSHI_RS05235 | Not Available | Positive | 1057354 - 1058706 | 46481.8 |
| d(cmp) kinase | DSHI_RS05240 | Not Available | Positive | 1058724 - 1059362 | 22338.9 |
| h-ns family nucleoid-associated regulatory protein | DSHI_RS05245 | Not Available | Positive | 1059484 - 1059801 | 11450.6 |
| 30s ribosomal protein s1 | DSHI_RS05250 | Not Available | Positive | 1059994 - 1061700 | 62726.3 |
| inner membrane-spanning protein ycib | DSHI_RS21305 | Not Available | Negative | 1061749 - 1062312 | 20330.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
