Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybcc family protein | DSHI_RS05110 | Not Available | Positive | 1027607 - 1029982 | 82261.2 |
| adenine deaminase | DSHI_RS05115 | Not Available | Negative | 1030013 - 1031707 | 60283.4 |
| bile acid:sodium symporter family protein | DSHI_RS05120 | Not Available | Negative | 1031760 - 1032641 | 31445.9 |
| long-chain-fatty-acid--coa ligase | DSHI_RS05125 | Not Available | Negative | 1032645 - 1034366 | 62465.1 |
| hydroxyacid dehydrogenase | DSHI_RS05130 | Not Available | Negative | 1034458 - 1035408 | 33339.4 |
| plp-dependent aspartate aminotransferase family protein | DSHI_RS05135 | Not Available | Negative | 1035541 - 1036683 | 39442.1 |
| phosphotransferase family protein | DSHI_RS05140 | Not Available | Negative | 1036698 - 1037711 | 36295.4 |
| acyl-coa dehydrogenase family protein | DSHI_RS05145 | Not Available | Negative | 1037708 - 1038925 | 44916.9 |
| yihy/virulence factor brkb family protein | DSHI_RS05150 | Not Available | Positive | 1039022 - 1039978 | 33939.8 |
| tcr/tet family mfs transporter | DSHI_RS05155 | Not Available | Negative | 1039975 - 1041198 | 43445.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
