Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DSHI_RS04860 | Not Available | Negative | 975412 - 975882 | 15381.9 |
| tryptophan synthase subunit alpha | DSHI_RS04865 | Not Available | Negative | 976376 - 977167 | 27608.1 |
| mate family efflux transporter | DSHI_RS04870 | Not Available | Negative | 977230 - 978576 | 46578.8 |
| redox-regulated atpase ychf | DSHI_RS04875 | Not Available | Positive | 978833 - 979930 | 39148.8 |
| aspartate/glutamate racemase family protein | DSHI_RS04880 | Not Available | Negative | 979967 - 980662 | 23707.7 |
| trap transporter large permease | DSHI_RS04885 | Not Available | Negative | 980662 - 981948 | 45001.2 |
| trap transporter small permease | DSHI_RS04890 | Not Available | Negative | 981948 - 982469 | 18630.3 |
| trap transporter substrate-binding protein | DSHI_RS04895 | Not Available | Negative | 982492 - 983472 | 35175.6 |
| murr/rpir family transcriptional regulator | DSHI_RS04900 | Not Available | Negative | 983690 - 984535 | 30086.0 |
| gntr family transcriptional regulator | DSHI_RS04905 | Not Available | Positive | 984738 - 985418 | 25405.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
