Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6544 family protein | DSHI_RS04810 | Not Available | Positive | 966631 - 967482 | 31401.9 |
| m23 family metallopeptidase | DSHI_RS04815 | Not Available | Positive | 967488 - 968444 | 33827.4 |
| cpbp family intramembrane glutamic endopeptidase | DSHI_RS04820 | Not Available | Negative | 968525 - 969388 | 31785.6 |
| hypothetical protein | DSHI_RS04825 | Not Available | Negative | 969742 - 970260 | 17664.2 |
| peptidoglycan-binding protein | DSHI_RS22130 | Not Available | Negative | 970257 - 971039 | 28299.6 |
| duf2237 family protein | DSHI_RS04835 | Not Available | Negative | 971323 - 971721 | 14492.1 |
| aminoacyl-trna hydrolase | DSHI_RS04840 | Not Available | Negative | 971779 - 972486 | 25490.4 |
| alpha-hydroxy acid oxidase | DSHI_RS04845 | Not Available | Positive | 972616 - 973788 | 43090.0 |
| hypothetical protein | DSHI_RS04850 | Not Available | Positive | 973840 - 974457 | 22865.5 |
| 50s ribosomal protein l25/general stress protein ctc | DSHI_RS04855 | Not Available | Positive | 974567 - 975202 | 22744.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
