Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 2 (bif-2) | SAMN04488695_101528 | Not Available | Negative | 554358 - 556457 | 76445.4 |
| ribosomal protein l7ae | SAMN04488695_101529 | Not Available | Negative | 556475 - 556813 | 12937.8 |
| hypothetical protein | SAMN04488695_101530 | Not Available | Negative | 556782 - 557048 | 10008.6 |
| nusa antitermination factor | SAMN04488695_101531 | Not Available | Negative | 557075 - 558277 | 45128.8 |
| ribosome maturation factor rimp | SAMN04488695_101532 | Not Available | Negative | 558297 - 558749 | 17181.6 |
| dna polymerase iii catalytic subunit, polc type | SAMN04488695_101533 | Not Available | Negative | 558930 - 563195 | 160467.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488695_101534 | Not Available | Negative | 563222 - 564274 | 38054.5 |
| regulator of sigma e protease | SAMN04488695_101535 | Not Available | Negative | 564274 - 565278 | 36053.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN04488695_101536 | Not Available | Negative | 565283 - 566437 | 42216.2 |
| copg-like rhh_1 or ribbon-helix-helix domain-containing protein, rhh_5 | SAMN04488695_101537 | Not Available | Negative | 566696 - 566833 | 5385.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.