Proteiniclasticum ruminis

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Proteiniclasticum

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusProteiniclasticum
SpeciesProteiniclasticum ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatantibiotic-contaminated sites adjacent to livestock facilities; sediment samples
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Proteiniclasticum ruminis strain ML2 genome assembly, contig:

Gene Summary

Adenine Count

890186 bp

Thymine Count

899943 bp

Guanine Count

677362 bp

Cytosine Count

705569 bp

Genome Length

3173070 bp

Protein-coding Genes

2909 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuraseSAMN04488695_101508Not AvailableNegative535639 - 53686246125.4
fes assembly protein sufdSAMN04488695_101509Not AvailableNegative536864 - 53793440003.8
fe-s cluster assembly protein sufbSAMN04488695_101510Not AvailableNegative537945 - 53935452625.5
fe-s cluster assembly atp-binding proteinSAMN04488695_101511Not AvailableNegative539327 - 54010628954.1
glycine hydroxymethyltransferaseSAMN04488695_101512Not AvailableNegative540296 - 54152845676.7
uncharacterized membrane protein yjjp, duf1212 familySAMN04488695_101513Not AvailablePositive541816 - 54257427294.2
uncharacterized membrane protein yjjb, duf3815 familySAMN04488695_101514Not AvailablePositive542576 - 54302216620.7
hypothetical proteinSAMN04488695_101515Not AvailablePositive543009 - 5431706345.67
haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN04488695_101516Not AvailablePositive543182 - 54390127771.2
uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein familySAMN04488695_101517Not AvailableNegative543955 - 5442188912.46

Displaying genes 581 – 590 of 3010 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.