Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | SAMN04488695_101498 | Not Available | Negative | 526095 - 527252 | 42404.0 |
| rrf2 family protein | SAMN04488695_101499 | Not Available | Negative | 527242 - 527694 | 17073.9 |
| putative atpase | SAMN04488695_101500 | Not Available | Negative | 527766 - 529037 | 47272.6 |
| hypothetical protein | SAMN04488695_101501 | Not Available | Positive | 529230 - 529466 | 9004.0 |
| beta-glucosidase | SAMN04488695_101502 | Not Available | Negative | 529507 - 531954 | 91424.7 |
| 3-dehydroquinate dehydratase | SAMN04488695_101503 | Not Available | Negative | 531975 - 532730 | 28248.1 |
| broad specificity phosphatase phoe | SAMN04488695_101504 | Not Available | Negative | 532727 - 533725 | 38446.8 |
| histidinol-phosphatase (php family) | SAMN04488695_101505 | Not Available | Negative | 533751 - 534518 | 30305.7 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04488695_101506 | Not Available | Negative | 534537 - 535046 | 19343.0 |
| nitrogen fixation protein nifu | SAMN04488695_101507 | Not Available | Negative | 535218 - 535652 | 16196.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.