Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavorubredoxin | SAMN04488695_101478 | Not Available | Positive | 506470 - 507678 | 45401.4 |
| twitching motility protein pilt | SAMN04488695_101479 | Not Available | Negative | 507702 - 508676 | 36301.0 |
| shikimate dehydrogenase | SAMN04488695_101480 | Not Available | Negative | 508649 - 509410 | 28977.1 |
| uridine kinase | SAMN04488695_101481 | Not Available | Negative | 509500 - 510177 | 26059.4 |
| putative protease | SAMN04488695_101482 | Not Available | Negative | 510174 - 511400 | 46398.7 |
| predicted o-methyltransferase yrrm | SAMN04488695_101483 | Not Available | Negative | 511403 - 512035 | 23954.1 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04488695_101484 | Not Available | Negative | 512159 - 512737 | 21880.6 |
| upf0755 protein | SAMN04488695_101485 | Not Available | Negative | 512819 - 513841 | 38734.4 |
| gtp-binding protein | SAMN04488695_101486 | Not Available | Negative | 513872 - 515689 | 67487.2 |
| cell fate regulator ylbf, yhea/ymca/duf963 family (controls sporulation, competence, biofilm development) | SAMN04488695_101487 | Not Available | Negative | 515853 - 516200 | 13024.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.