Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 3 (bif-3) | SAMN04488695_101306 | Not Available | Positive | 326745 - 327209 | 17549.5 |
| lsu ribosomal protein l35p | SAMN04488695_101307 | Not Available | Positive | 327232 - 327429 | 7575.6 |
| lsu ribosomal protein l20p | SAMN04488695_101308 | Not Available | Positive | 327455 - 327811 | 13453.9 |
| trk system potassium uptake protein trkh | SAMN04488695_101309 | Not Available | Positive | 328044 - 329399 | 48600.9 |
| trk system potassium uptake protein trka | SAMN04488695_101310 | Not Available | Positive | 329410 - 330075 | 24126.2 |
| rna methyltransferase, trmh family | SAMN04488695_101311 | Not Available | Positive | 330068 - 330871 | 29822.0 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488695_101312 | Not Available | Positive | 331259 - 332281 | 38623.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN04488695_101313 | Not Available | Positive | 332294 - 334657 | 87991.3 |
| cell division protein zapa | SAMN04488695_101314 | Not Available | Positive | 334803 - 335444 | 25244.2 |
| putative protease | SAMN04488695_101315 | Not Available | Positive | 335544 - 337889 | 88657.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.