Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN04488695_101235 | Not Available | Positive | 243628 - 245544 | 74505.7 |
| glucose-1-phosphate adenylyltransferase | SAMN04488695_101236 | Not Available | Positive | 245544 - 246677 | 42267.8 |
| glucose-1-phosphate adenylyltransferase | SAMN04488695_101237 | Not Available | Positive | 246679 - 247815 | 42714.2 |
| starch synthase | SAMN04488695_101238 | Not Available | Positive | 247825 - 249258 | 55022.7 |
| starch phosphorylase | SAMN04488695_101239 | Not Available | Positive | 249272 - 251695 | 93105.8 |
| alpha-glucosidase | SAMN04488695_101240 | Not Available | Positive | 251798 - 253624 | 70283.4 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488695_101241 | Not Available | Negative | 253687 - 255051 | 51391.8 |
| competence protein comea | SAMN04488695_101242 | Not Available | Positive | 255162 - 255743 | 21542.8 |
| glutamyl-trna synthetase | SAMN04488695_101243 | Not Available | Negative | 255827 - 257293 | 55987.3 |
| competence protein comec | SAMN04488695_101244 | Not Available | Negative | 257377 - 258270 | 33150.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.