Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04488695_1276 | Not Available | Negative | 3143509 - 3144768 | 46474.0 |
| leucyl aminopeptidase (aminopeptidase t) | SAMN04488695_1277 | Not Available | Negative | 3144800 - 3145933 | 42424.2 |
| Trna-lys | Not Available | Not Available | Positive | 3146167 - 3146242 | Not Available |
| hypothetical protein | SAMN04488695_1281 | Not Available | Positive | 3146243 - 3146521 | 10655.8 |
| hypothetical protein | SAMN04488695_1282 | Not Available | Negative | 3146749 - 3147675 | 35987.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488695_1283 | Not Available | Positive | 3147918 - 3148370 | 17600.7 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488695_1284 | Not Available | Positive | 3148579 - 3149010 | 16411.1 |
| hypothetical protein | SAMN04488695_1285 | Not Available | Positive | 3149012 - 3149395 | 15153.4 |
| hypothetical protein | SAMN04488695_1286 | Not Available | Negative | 3149376 - 3149480 | 4013.93 |
| hypothetical protein | SAMN04488695_1287 | Not Available | Positive | 3149990 - 3150217 | 8694.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.