Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04488695_1259 | Not Available | Negative | 3123141 - 3124400 | 44668.3 |
| hypothetical protein | SAMN04488695_12510 | Not Available | Positive | 3124760 - 3125311 | 21292.1 |
| dnad and phage-associated domain-containing protein | SAMN04488695_12511 | Not Available | Positive | 3125423 - 3126418 | 38312.2 |
| dna replication protein dnac | SAMN04488695_12512 | Not Available | Positive | 3126415 - 3127398 | 38177.2 |
| Trna-thr | Not Available | Not Available | Positive | 3127654 - 3127728 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3127732 - 3127808 | Not Available |
| integrase core domain-containing protein | SAMN04488695_1261 | Not Available | Positive | 3127827 - 3129062 | 47701.1 |
| dna replication protein dnac | SAMN04488695_1262 | Not Available | Positive | 3129059 - 3129820 | 29283.4 |
| transposase | SAMN04488695_1263 | Not Available | Negative | 3130061 - 3130675 | 23290.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04488695_1264 | Not Available | Negative | 3131181 - 3132110 | 35765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.