Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl aminopeptidase | SAMN04488695_12012 | Not Available | Positive | 3014204 - 3014980 | 28725.1 |
| hypothetical protein | SAMN04488695_12013 | Not Available | Positive | 3015527 - 3016099 | 22217.7 |
| protein of unknown function | SAMN04488695_12014 | Not Available | Positive | 3016118 - 3016603 | 18650.4 |
| thiamine biosynthesis lipoprotein | SAMN04488695_12015 | Not Available | Positive | 3016728 - 3017795 | 40372.4 |
| hypothetical protein | SAMN04488695_12016 | Not Available | Positive | 3017967 - 3018419 | 17683.2 |
| beta-lysine 5,6-aminomutase beta subunit /d-lysine 5,6-aminomutase beta subunit | SAMN04488695_12017 | Not Available | Negative | 3018846 - 3019634 | 28833.7 |
| beta-lysine 5,6-aminomutase alpha subunit /d-lysine 5,6-aminomutase alpha subunit | SAMN04488695_12018 | Not Available | Negative | 3019634 - 3021190 | 57593.7 |
| muts domain v | SAMN04488695_12019 | Not Available | Negative | 3021201 - 3022634 | 54975.9 |
| hypothetical protein | SAMN04488695_12020 | Not Available | Negative | 3022621 - 3023673 | 39054.8 |
| l-lysine 2,3-aminomutase | SAMN04488695_12021 | Not Available | Negative | 3023636 - 3024889 | 47344.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.