Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN04488695_101196 | Not Available | Positive | 205617 - 206069 | 17344.3 |
| signal transduction histidine kinase | SAMN04488695_101197 | Not Available | Negative | 206118 - 207554 | 54380.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488695_101198 | Not Available | Negative | 207555 - 208244 | 26079.6 |
| cell wall-associated hydrolase, nlpc family | SAMN04488695_101199 | Not Available | Positive | 208539 - 209879 | 49055.2 |
| protein of unknown function | SAMN04488695_101200 | Not Available | Positive | 209957 - 211087 | 41553.4 |
| hypothetical protein | SAMN04488695_101201 | Not Available | Positive | 211148 - 211309 | 5850.18 |
| dcmp deaminase | SAMN04488695_101202 | Not Available | Negative | 211345 - 211836 | 18545.4 |
| elaa protein | SAMN04488695_101203 | Not Available | Negative | 211829 - 212287 | 17716.3 |
| polyphosphate:amp phosphotransferase | SAMN04488695_101204 | Not Available | Positive | 212496 - 213950 | 58386.4 |
| neurotransmitter:na+ symporter, nss family | SAMN04488695_101205 | Not Available | Positive | 214278 - 215630 | 48651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.