Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04488695_11439 | Not Available | Negative | 2804465 - 2805457 | 37566.1 |
| hd domain-containing protein | SAMN04488695_11440 | Not Available | Negative | 2805447 - 2805926 | 18573.8 |
| dutp pyrophosphatase | SAMN04488695_11441 | Not Available | Positive | 2806048 - 2806674 | 23253.9 |
| hypothetical protein | SAMN04488695_11442 | Not Available | Positive | 2806655 - 2806753 | 3765.39 |
| thioredoxin | SAMN04488695_11443 | Not Available | Negative | 2806720 - 2807034 | 11830.4 |
| putative redox protein | SAMN04488695_11444 | Not Available | Negative | 2807176 - 2807577 | 14984.1 |
| [citrate (pro-3s)-lyase] ligase | SAMN04488695_11445 | Not Available | Negative | 2807669 - 2808703 | 39451.3 |
| oxaloacetate decarboxylase, alpha subunit | SAMN04488695_11446 | Not Available | Negative | 2808825 - 2810216 | 52031.2 |
| holo-acp synthase | SAMN04488695_11447 | Not Available | Negative | 2810203 - 2810763 | 21558.4 |
| citrate lyase subunit alpha / citrate coa-transferase | SAMN04488695_11448 | Not Available | Negative | 2810783 - 2812321 | 54672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.