Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488695_11235 | Not Available | Negative | 2703601 - 2704083 | 18764.8 |
| rlob-like protein | SAMN04488695_11236 | Not Available | Negative | 2704441 - 2705124 | 26384.6 |
| atpase/gtpase, aaa15 family | SAMN04488695_11237 | Not Available | Negative | 2705135 - 2706316 | 45933.5 |
| uncharacterized phage-associated protein | SAMN04488695_11238 | Not Available | Negative | 2706513 - 2707532 | 39617.4 |
| hypothetical protein | SAMN04488695_11239 | Not Available | Negative | 2707934 - 2712355 | 173607.0 |
| hypothetical protein | SAMN04488695_11240 | Not Available | Negative | 2712339 - 2713052 | 27833.4 |
| hypothetical protein | SAMN04488695_11241 | Not Available | Negative | 2713039 - 2714658 | 64185.0 |
| hypothetical protein | SAMN04488695_11242 | Not Available | Negative | 2714651 - 2715694 | 41358.6 |
| transposase dde domain-containing protein | SAMN04488695_1131 | Not Available | Positive | 2716315 - 2716883 | 22539.3 |
| putative efflux protein, mate family | SAMN04488695_1132 | Not Available | Negative | 2717049 - 2718398 | 49661.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.