Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosyl-trna synthetase | SAMN04488695_11160 | Not Available | Positive | 2651677 - 2652897 | 46278.9 |
| hypothetical protein | SAMN04488695_11161 | Not Available | Positive | 2652897 - 2653586 | 26642.0 |
| transketolase | SAMN04488695_11162 | Not Available | Positive | 2653645 - 2655642 | 72599.3 |
| hypothetical protein | SAMN04488695_11163 | Not Available | Positive | 2655748 - 2656521 | 28337.9 |
| putative gtp pyrophosphokinase | SAMN04488695_11164 | Not Available | Positive | 2656609 - 2657397 | 30581.3 |
| hypothetical protein | SAMN04488695_11165 | Not Available | Positive | 2657593 - 2657961 | 13852.0 |
| crispr-associated protein, cas2 family | SAMN04488695_1121 | Not Available | Negative | 2658041 - 2658349 | 11887.6 |
| crispr-associated protein, cas1 family | SAMN04488695_1122 | Not Available | Negative | 2658366 - 2659268 | 34419.9 |
| crispr-associated endonuclease csn1 | SAMN04488695_1123 | Not Available | Negative | 2659219 - 2662464 | 127363.0 |
| diamine n-acetyltransferase | SAMN04488695_1124 | Not Available | Negative | 2663126 - 2663599 | 17655.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.