Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488695_11120 | Not Available | Positive | 2612438 - 2612872 | 16675.3 |
| muramoyltetrapeptide carboxypeptidase ldca (peptidoglycan recycling) | SAMN04488695_11121 | Not Available | Positive | 2612952 - 2613998 | 39467.6 |
| hypothetical protein | SAMN04488695_11122 | Not Available | Positive | 2614182 - 2614634 | 17094.2 |
| hypothetical protein | SAMN04488695_11123 | Not Available | Positive | 2614718 - 2615002 | 10679.6 |
| hypothetical protein | SAMN04488695_11124 | Not Available | Negative | 2615068 - 2615271 | 7905.99 |
| dna-binding transcriptional regulator, merr family | SAMN04488695_11125 | Not Available | Negative | 2615445 - 2616902 | 57240.9 |
| hypothetical protein | SAMN04488695_11126 | Not Available | Negative | 2617050 - 2617385 | 12909.1 |
| abc-2 type transport system permease protein | SAMN04488695_11127 | Not Available | Negative | 2617414 - 2619093 | 63107.9 |
| abc-2 type transport system atp-binding protein | SAMN04488695_11128 | Not Available | Negative | 2619080 - 2619808 | 27155.0 |
| large conductance mechanosensitive channel | SAMN04488695_11129 | Not Available | Negative | 2620044 - 2620430 | 13931.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.