Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(5)u-1939 methyltransferase | SAMN04488695_11054 | Not Available | Positive | 2585033 - 2586391 | 50383.8 |
| protein of unknown function | SAMN04488695_11055 | Not Available | Positive | 2586645 - 2587481 | 32976.5 |
| site-specific dna recombinase | SAMN04488695_11056 | Not Available | Negative | 2587625 - 2589190 | 59914.8 |
| hypothetical protein | SAMN04488695_11057 | Not Available | Negative | 2589180 - 2589608 | 15913.9 |
| transposase dde domain group 1 | SAMN04488695_11058 | Not Available | Negative | 2589823 - 2590311 | 18505.8 |
| hypothetical protein | SAMN04488695_11059 | Not Available | Negative | 2590498 - 2590698 | 7387.73 |
| prevent-host-death family protein | SAMN04488695_11060 | Not Available | Positive | 2591111 - 2591383 | 10347.3 |
| plasmid stabilization system protein pare | SAMN04488695_11061 | Not Available | Positive | 2591370 - 2591684 | 12166.7 |
| site-specific dna recombinase | SAMN04488695_11062 | Not Available | Positive | 2592021 - 2593541 | 58549.1 |
| peptidase c39 family protein | SAMN04488695_11063 | Not Available | Positive | 2593881 - 2594204 | 11807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.