Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine decarboxylase | SAMN04488695_1104 | Not Available | Positive | 2520376 - 2521182 | 31282.9 |
| spermidine synthase | SAMN04488695_1105 | Not Available | Positive | 2521193 - 2522050 | 33234.2 |
| hypothetical protein | SAMN04488695_1106 | Not Available | Positive | 2522071 - 2522163 | 3690.56 |
| hypothetical protein | SAMN04488695_1107 | Not Available | Positive | 2522168 - 2522779 | 23430.5 |
| peroxiredoxin q/bcp | SAMN04488695_1108 | Not Available | Negative | 2522822 - 2523289 | 17603.9 |
| peptidyl-prolyl cis-trans isomerase c | SAMN04488695_1109 | Not Available | Positive | 2523452 - 2524204 | 28353.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488695_11010 | Not Available | Negative | 2524263 - 2524925 | 25345.9 |
| undecaprenyl-diphosphatase | SAMN04488695_11011 | Not Available | Negative | 2524915 - 2525454 | 19651.6 |
| trna1(val) a37 n6-methylase trmn6 | SAMN04488695_11012 | Not Available | Positive | 2525598 - 2526341 | 28192.3 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04488695_11013 | Not Available | Positive | 2526338 - 2527180 | 31866.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.