Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ykoi | SAMN04488695_10971 | Not Available | Negative | 2492406 - 2493863 | 55104.1 |
| uncharacterized membrane protein ykoi | SAMN04488695_10972 | Not Available | Negative | 2493939 - 2495048 | 42781.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488695_10973 | Not Available | Negative | 2495045 - 2495629 | 22562.2 |
| predicted n-acetyltransferase yhbs | SAMN04488695_10974 | Not Available | Positive | 2495935 - 2496762 | 31225.7 |
| hypothetical protein | SAMN04488695_10975 | Not Available | Positive | 2496773 - 2497792 | 40077.6 |
| uncharacterized protein | SAMN04488695_10976 | Not Available | Positive | 2498117 - 2499436 | 49806.1 |
| protein of unknown function | SAMN04488695_10977 | Not Available | Negative | 2499752 - 2500984 | 47922.2 |
| aspartyl aminopeptidase | SAMN04488695_10978 | Not Available | Negative | 2501105 - 2502481 | 50839.8 |
| hypothetical protein | SAMN04488695_10979 | Not Available | Negative | 2502672 - 2508710 | 219694.0 |
| csbd-like | SAMN04488695_10980 | Not Available | Negative | 2509135 - 2509350 | 8289.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.