Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | SAMN04488695_10941 | Not Available | Positive | 2457454 - 2458842 | 52744.9 |
| hypothetical protein | SAMN04488695_10942 | Not Available | Negative | 2458916 - 2459731 | 30721.4 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN04488695_10943 | Not Available | Negative | 2459724 - 2460215 | 19290.1 |
| branched-chain amino acid:cation transporter, livcs family | SAMN04488695_10944 | Not Available | Negative | 2460418 - 2461761 | 48417.0 |
| pp_02289 | SAMN04488695_10945 | Not Available | Negative | 2461808 - 2462512 | Not Available |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488695_10946 | Not Available | Negative | 2462561 - 2463421 | 31765.5 |
| catechol 2,3-dioxygenase | SAMN04488695_10947 | Not Available | Positive | 2463663 - 2464085 | 16283.4 |
| hypothetical protein | SAMN04488695_10948 | Not Available | Negative | 2464232 - 2464432 | 7344.89 |
| hypothetical protein | SAMN04488695_10949 | Not Available | Negative | 2464511 - 2464960 | 17204.8 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN04488695_10950 | Not Available | Negative | 2465127 - 2466017 | 34359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.