Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488695_10921 | Not Available | Negative | 2438161 - 2438313 | 6042.26 |
| yggt family protein | SAMN04488695_10922 | Not Available | Negative | 2438348 - 2438722 | 14011.1 |
| transcriptional regulator, tetr family | SAMN04488695_10923 | Not Available | Negative | 2438769 - 2439335 | 22097.7 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04488695_10924 | Not Available | Positive | 2439927 - 2440811 | 34034.9 |
| oligopeptide transport system substrate-binding protein | SAMN04488695_10925 | Not Available | Negative | 2440932 - 2442674 | 63621.0 |
| oligopeptide transport system atp-binding protein | SAMN04488695_10926 | Not Available | Negative | 2442786 - 2443748 | 35916.7 |
| oligopeptide transport system atp-binding protein | SAMN04488695_10927 | Not Available | Negative | 2443726 - 2444745 | 37482.6 |
| oligopeptide transport system permease protein | SAMN04488695_10928 | Not Available | Negative | 2444750 - 2445820 | 39309.7 |
| oligopeptide transport system permease protein | SAMN04488695_10929 | Not Available | Negative | 2445833 - 2446744 | 32992.3 |
| pyridoxamine 5'-phosphate oxidase | SAMN04488695_10930 | Not Available | Positive | 2447316 - 2447762 | 16762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.