Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase cpaa | SAMN04488695_10874 | Not Available | Positive | 2379813 - 2380382 | 20658.1 |
| tade-like protein | SAMN04488695_10875 | Not Available | Positive | 2380403 - 2380816 | 15062.3 |
| putative flp pilus-assembly tade/g-like | SAMN04488695_10876 | Not Available | Positive | 2380832 - 2381971 | 41460.8 |
| pilus assembly protein cpab | SAMN04488695_10877 | Not Available | Positive | 2382061 - 2382786 | 26053.6 |
| pilus assembly protein cpae | SAMN04488695_10878 | Not Available | Positive | 2382787 - 2383950 | 43455.4 |
| pilus assembly protein cpaf | SAMN04488695_10879 | Not Available | Positive | 2383985 - 2385361 | 51357.1 |
| tight adherence protein b | SAMN04488695_10880 | Not Available | Positive | 2385367 - 2386332 | 35783.0 |
| tight adherence protein c | SAMN04488695_10881 | Not Available | Positive | 2386345 - 2387268 | 34442.2 |
| von willebrand factor type a domain-containing protein | SAMN04488695_10882 | Not Available | Positive | 2387274 - 2389796 | 93386.0 |
| hypothetical protein | SAMN04488695_10883 | Not Available | Positive | 2389793 - 2390137 | 12707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.