Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488695_10854 | Not Available | Positive | 2359656 - 2360150 | 19668.6 |
| putative zinc-finger | SAMN04488695_10855 | Not Available | Positive | 2360140 - 2361099 | 36323.2 |
| hypothetical protein | SAMN04488695_10856 | Not Available | Positive | 2361222 - 2361800 | 22901.0 |
| pas domain s-box-containing protein | SAMN04488695_10857 | Not Available | Positive | 2362093 - 2364051 | 74440.9 |
| two component transcriptional regulator, arac family | SAMN04488695_10858 | Not Available | Positive | 2364052 - 2365170 | 43655.2 |
| hypothetical protein | SAMN04488695_10859 | Not Available | Positive | 2365307 - 2366245 | 34766.2 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488695_10860 | Not Available | Positive | 2366493 - 2367560 | 40183.2 |
| hypothetical protein | SAMN04488695_10861 | Not Available | Positive | 2367794 - 2368789 | 37303.0 |
| hypothetical protein | SAMN04488695_10862 | Not Available | Positive | 2368811 - 2369413 | 22701.6 |
| dna-binding transcriptional regulator, padr family | SAMN04488695_10863 | Not Available | Positive | 2369554 - 2369901 | 13327.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.