Proteiniclasticum ruminis

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Proteiniclasticum

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusProteiniclasticum
SpeciesProteiniclasticum ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatantibiotic-contaminated sites adjacent to livestock facilities; sediment samples
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Proteiniclasticum ruminis strain ML2 genome assembly, contig:

Gene Summary

Adenine Count

890186 bp

Thymine Count

899943 bp

Guanine Count

677362 bp

Cytosine Count

705569 bp

Genome Length

3173070 bp

Protein-coding Genes

2909 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor transport system atp-binding proteinSAMN04488695_10834Not AvailablePositive2337031 - 233790032495.7
energy-coupling factor transport system permease proteinSAMN04488695_10835Not AvailablePositive2337893 - 233870831371.8
trna pseudouridine38-40 synthaseSAMN04488695_10836Not AvailablePositive2338784 - 233953928630.7
diguanylate cyclase (ggdef) domain-containing proteinSAMN04488695_10837Not AvailablePositive2339773 - 234091544659.6
diguanylate cyclase (ggdef) domain-containing proteinSAMN04488695_10838Not AvailablePositive2341095 - 234225245343.8
putative acetyltransferaseSAMN04488695_10839Not AvailablePositive2342233 - 234265816207.6
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN04488695_10840Not AvailablePositive2343162 - 234381824456.9
signal transduction histidine kinaseSAMN04488695_10841Not AvailablePositive2343818 - 234560566693.5
lsu ribosomal protein l13pSAMN04488695_10842Not AvailablePositive2345896 - 234633016219.0
ssu ribosomal protein s9pSAMN04488695_10843Not AvailablePositive2346350 - 234674214420.9

Displaying genes 2221 – 2230 of 3010 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.