Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moxr-like atpase | SAMN04488695_106137 | Not Available | Negative | 2159558 - 2160505 | 35419.1 |
| hypothetical protein | SAMN04488695_106138 | Not Available | Negative | 2160544 - 2160987 | 16754.5 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488695_106139 | Not Available | Negative | 2161231 - 2162340 | 39464.3 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488695_106140 | Not Available | Negative | 2162398 - 2163396 | 35445.0 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488695_106141 | Not Available | Negative | 2163393 - 2164418 | 36307.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488695_106142 | Not Available | Negative | 2164415 - 2165941 | 55848.8 |
| lsr operon transcriptional repressor | SAMN04488695_106143 | Not Available | Positive | 2166232 - 2167155 | 34417.6 |
| autoinducer 2 (ai-2) kinase | SAMN04488695_106144 | Not Available | Positive | 2167168 - 2168733 | 57955.7 |
| cupin domain-containing protein | SAMN04488695_106145 | Not Available | Positive | 2168745 - 2169116 | 14417.1 |
| putative autoinducer-2 (ai-2) aldolase | SAMN04488695_106146 | Not Available | Positive | 2169116 - 2170006 | 32629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.