Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488695_10676 | Not Available | Positive | 2093640 - 2093882 | 9670.47 |
| hypothetical protein | SAMN04488695_10677 | Not Available | Positive | 2093921 - 2094472 | 21487.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488695_10678 | Not Available | Positive | 2094656 - 2095171 | 19702.8 |
| protein of unknown function | SAMN04488695_10679 | Not Available | Positive | 2095158 - 2096507 | 51941.6 |
| hypothetical protein | SAMN04488695_10680 | Not Available | Negative | 2096600 - 2098744 | 82636.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04488695_10681 | Not Available | Negative | 2099021 - 2100103 | 40940.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488695_10682 | Not Available | Negative | 2100296 - 2101030 | 26962.2 |
| transposase is200 like | SAMN04488695_10683 | Not Available | Positive | 2101172 - 2101876 | 27055.5 |
| alkyl hydroperoxide reductase subunit f | SAMN04488695_10684 | Not Available | Positive | 2101969 - 2102952 | 35079.2 |
| glutaredoxin-like domain protein | SAMN04488695_10685 | Not Available | Positive | 2103003 - 2103647 | 24212.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.