Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene synthase | SAMN04488695_104174 | Not Available | Positive | 1772189 - 1773133 | 36117.4 |
| tigr00297 family protein | SAMN04488695_104175 | Not Available | Positive | 1773166 - 1774608 | 51682.2 |
| hypothetical protein | SAMN04488695_104176 | Not Available | Negative | 1774690 - 1774941 | 9507.91 |
| hypothetical protein | SAMN04488695_104177 | Not Available | Negative | 1775013 - 1775555 | 20740.4 |
| hypothetical protein | SAMN04488695_104178 | Not Available | Negative | 1775599 - 1775958 | 14208.1 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN04488695_104179 | Not Available | Negative | 1775970 - 1777391 | 55161.8 |
| predicted transcriptional regulator | SAMN04488695_104180 | Not Available | Negative | 1777388 - 1777747 | 13650.2 |
| mannose-6-phosphate isomerase, type 1 | SAMN04488695_104181 | Not Available | Positive | 1777955 - 1778899 | 35770.4 |
| carbon starvation protein csta | SAMN04488695_104182 | Not Available | Negative | 1778997 - 1780421 | 51259.2 |
| two component transcriptional regulator, lyttr family | SAMN04488695_104183 | Not Available | Negative | 1780570 - 1781304 | 28472.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.