Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein/hdig domain-containing protein | SAMN04488695_10187 | Not Available | Positive | 89090 - 92149 | 116433.0 |
| hypothetical protein | SAMN04488695_10188 | Not Available | Positive | 92303 - 93103 | 29645.2 |
| branched-chain amino acid aminotransferase | SAMN04488695_10189 | Not Available | Positive | 93427 - 94503 | 40088.3 |
| hypothetical protein | SAMN04488695_10190 | Not Available | Negative | 94589 - 95173 | 22565.3 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04488695_10191 | Not Available | Positive | 95546 - 96412 | 32347.6 |
| Trna-val | Not Available | Not Available | Positive | 96662 - 96737 | Not Available |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN04488695_10193 | Not Available | Positive | 96846 - 97316 | 17177.2 |
| hypothetical protein | SAMN04488695_10194 | Not Available | Positive | 97451 - 98005 | 21117.4 |
| hypothetical protein | SAMN04488695_10195 | Not Available | Negative | 98057 - 98473 | 15082.6 |
| hypothetical protein | SAMN04488695_10196 | Not Available | Positive | 98874 - 100193 | 51432.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.