Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | SAMN04488695_104154 | Not Available | Negative | 1746442 - 1747089 | 24241.9 |
| protein of unknown function | SAMN04488695_104155 | Not Available | Positive | 1747237 - 1747728 | 18841.9 |
| catechol 2,3-dioxygenase | SAMN04488695_104156 | Not Available | Positive | 1747861 - 1748652 | 30576.4 |
| fructose-1,6-bisphosphatase-3 | SAMN04488695_104157 | Not Available | Negative | 1748753 - 1750771 | 77854.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04488695_104158 | Not Available | Positive | 1751301 - 1752914 | 62702.6 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04488695_104159 | Not Available | Negative | 1753014 - 1755440 | 93038.9 |
| hypothetical protein | SAMN04488695_104160 | Not Available | Negative | 1755598 - 1756251 | 25059.0 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488695_104161 | Not Available | Negative | 1756331 - 1757350 | 38618.3 |
| protein of unknown function | SAMN04488695_104162 | Not Available | Negative | 1757833 - 1759269 | 51350.0 |
| succinyl-coa synthetase, alpha subunit | SAMN04488695_104163 | Not Available | Negative | 1759272 - 1760819 | 55610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.