Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine n-acetyltransferase | SAMN04488695_10493 | Not Available | Negative | 1687921 - 1688439 | 20066.5 |
| transcriptional regulator, gntr family | SAMN04488695_10494 | Not Available | Negative | 1688442 - 1689836 | 53036.9 |
| uncharacterized membrane protein | SAMN04488695_10495 | Not Available | Positive | 1689942 - 1690691 | 26709.5 |
| atp-dependent dna helicase recg | SAMN04488695_10496 | Not Available | Negative | 1690761 - 1692128 | 52387.9 |
| helix-turn-helix | SAMN04488695_10497 | Not Available | Negative | 1692284 - 1693318 | 40744.1 |
| putative abc transport system permease protein | SAMN04488695_10498 | Not Available | Negative | 1693568 - 1696315 | 99647.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488695_10499 | Not Available | Positive | 1696508 - 1697185 | 25689.3 |
| signal transduction histidine kinase | SAMN04488695_104100 | Not Available | Positive | 1697178 - 1698239 | 39931.9 |
| pyridoxamine 5'-phosphate oxidase | SAMN04488695_104101 | Not Available | Negative | 1698336 - 1698809 | 18032.0 |
| short c-terminal domain-containing protein | SAMN04488695_104102 | Not Available | Negative | 1698831 - 1699586 | 27338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.