Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN04488695_10453 | Not Available | Positive | 1641192 - 1641794 | 23667.4 |
| abc-2 family transporter protein | SAMN04488695_10454 | Not Available | Negative | 1641877 - 1642542 | 25044.9 |
| abc-2 type transport system atp-binding protein | SAMN04488695_10455 | Not Available | Negative | 1642539 - 1643396 | 31120.9 |
| transcriptional regulator, gntr family | SAMN04488695_10456 | Not Available | Negative | 1643389 - 1643772 | 14615.8 |
| oxaloacetate decarboxylase, beta subunit | SAMN04488695_10457 | Not Available | Negative | 1643936 - 1645048 | 38896.7 |
| biotin-requiring enzyme | SAMN04488695_10458 | Not Available | Negative | 1645057 - 1645401 | 11680.0 |
| sodium pump decarboxylases, gamma subunit | SAMN04488695_10459 | Not Available | Negative | 1645418 - 1645699 | 10251.7 |
| oxaloacetate decarboxylase, alpha subunit | SAMN04488695_10460 | Not Available | Negative | 1645708 - 1647126 | 52777.1 |
| l(+)-tartrate dehydratase beta subunit | SAMN04488695_10461 | Not Available | Negative | 1647290 - 1647898 | 22740.4 |
| l(+)-tartrate dehydratase alpha subunit | SAMN04488695_10462 | Not Available | Negative | 1647895 - 1648794 | 32986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.