Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Proteiniclasticum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Proteiniclasticum |
| Species | Proteiniclasticum ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | antibiotic-contaminated sites adjacent to livestock facilities; sediment samples |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
890186 bp
Thymine Count
899943 bp
Guanine Count
677362 bp
Cytosine Count
705569 bp
Genome Length
3173070 bp
Protein-coding Genes
2909 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenite efflux atp-binding protein arsa | SAMN04488695_103191 | Not Available | Positive | 1566919 - 1568661 | 65459.1 |
| hypothetical protein | SAMN04488695_103192 | Not Available | Positive | 1568792 - 1568992 | 7492.01 |
| trna(ile)-lysidine synthase | SAMN04488695_103193 | Not Available | Positive | 1569101 - 1570480 | 53601.9 |
| hypoxanthine phosphoribosyltransferase | SAMN04488695_103194 | Not Available | Positive | 1570477 - 1571019 | 20181.6 |
| membrane protease ftsh catalytic subunit | SAMN04488695_103195 | Not Available | Positive | 1571150 - 1573090 | 71703.1 |
| predicted thioesterase | SAMN04488695_103196 | Not Available | Positive | 1573316 - 1573633 | 11707.4 |
| formate-tetrahydrofolate ligase | SAMN04488695_103197 | Not Available | Positive | 1573662 - 1575332 | 60055.3 |
| arac-type dna-binding protein | SAMN04488695_103198 | Not Available | Negative | 1575367 - 1576233 | 33904.2 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488695_103199 | Not Available | Positive | 1576407 - 1577792 | 50326.3 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN04488695_103200 | Not Available | Positive | 1577865 - 1578755 | 33386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.